All metabolites (abbreviations in parenthesis) in ISO1-UNL were verified by comparison to individual standards.
Amino Acids and Derivatives | ||
S-Adenosylhomocysteine (SAH) | Glutamine (Gln) | Phenylalanine (Phe) |
Alanine (Ala) | Glycine (Gly) | Proline (Pro) |
Arginine (Arg) | Histidine (His) | Serine (Ser) |
Asparagine (Asn) | Isoleucine (Ile) | Threonine (Thr) |
Aspartic acid (Asp) | Leucine (Leu) | Tryptophan (Trp) |
Citrulline (Cit) | Lysine (Lys) | Tyrosine (Tyr) |
Cystathionine (Cysta) | Methionine (Met) | Valine (Val) |
Glutamic acid (Glu) | Ornithine (Orn) | |
Organic Acids | ||
cis-Aconitic acid (Aco) | α-Ketoglutaric acid (AKG) | 2-Phosphoglyceric acid (2PG) |
Citric acid (Cit) | Lactic acid (Lac) | 3-Phosphoglyceric acid (3PG) |
Dihydroxyisovalerate (DHIV) | Malic acid (Mali) | Pyruvic acid (Pyr) |
Fumaric acid (Fum) | Phosphoenol-pyruvic acid (PEP) | Succinic acid (Suc) |
Nucelobases, Nucleosides, Nucleotides | ||
Adenine (Ade) | 2’-Deoxyuridine (2DU) | N4-Acetylcytidine (NAc) |
Adenosine (Asn) | Guanine (Gnin) | Pseudouridine (PsU) |
Adenosine diphosphate (ADP) | Guanosine (Gsin) | Thymidine (Thy) |
Adenosine monophosphate (AMP) | Guanosine diphosphate (GDP) | Thymidine monophosphate (TMP) |
Adenosine triphosphate (ATP) | Guanosine triphosphate (GTP) | Uridine (Uri) |
5’-Adenosine monophosphate (5-AMP) | 5’-Guanosine monophosphate (5-GMP) | Uridine diphosphate (UDP) |
Cytidine diphosphate (CDP) | Hypoxanthine (HPX) | Uridine monophosphate (UMP) |
Cytidine triphosphate (CTP) | Inosine (Isin) | Uridine triphosphate (UTP) |
Cytidine (CYT) | Inosine monophosphate (IMP) | |
2’-Deoxycytidine (2DC) | 5-Methyluridine (5MU) | |
Sugar and Sugar Phosphates | ||
Fructose-1,6-bisphosphate (FBP) | Glucose-6-phosphate (G6P) | 6-Phosphogluconic acid (6PGA) |
Fructose-1-phosphate (F1P) | Mannitol (Man-Ol) | Ribose-5-phosphate (R5P) |
Fructose-6-phosphate (F6P) | Mannose-6-phosphate (M6P) | Sedoheptulose 7-phosphate (S7P) |
Glucose-1-phosphate (G1P) | Pentose-5-phosphate (P5P) | |
Vitamins and Coenzymes | ||
Acetyl coenzyme A (AcCoA) | Malonyl-coenzyme A (MaCoA) | Nicotinamide adenine dinucleotide phosphate (oxidized – NADP+, reduced – NADPH) |
Coenzyme A (CoA) | Nicotinamide (oxidized – NAD, reduced – NADH) | Propionyl-coenzyme A (PrCoA) |
Other Small Molecules | ||
Cysteinylglycine (Cys-Gly) | Glutamylcysteine (Glu-Cys) | Glutathione (oxidized – GSSG, reduced – GSH) |